Package: DSMolgenisArmadillo 2.0.10

Mariska Slofstra

DSMolgenisArmadillo: 'DataSHIELD' Client for 'MOLGENIS Armadillo'

'DataSHIELD' is an infrastructure and series of R packages that enables the remote and 'non-disclosive' analysis of sensitive research data. This package is the 'DataSHIELD' interface implementation to analyze data shared on a 'MOLGENIS Armadillo' server. 'MOLGENIS Armadillo' is a light-weight 'DataSHIELD' server using a file store and an 'RServe' server.

Authors:Mariska Slofstra [aut, cre], Sido Haakma [aut], Tommy de Boer [aut], Fleur Kelpin [aut], MOLGENIS org [cph, fnd]

DSMolgenisArmadillo_2.0.10.tar.gz
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DSMolgenisArmadillo.pdf |DSMolgenisArmadillo.html
DSMolgenisArmadillo/json (API)
NEWS

# Install 'DSMolgenisArmadillo' in R:
install.packages('DSMolgenisArmadillo', repos = c('https://molgenis.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/molgenis/molgenis-r-datashield/issues

On CRAN:

hacktoberfest

24 exports 1.88 score 38 dependencies 45 scripts 536 downloads

Last updated 2 months agofrom:6280e7cdd6. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 24 2024
R-4.5-winOKAug 24 2024
R-4.5-linuxOKAug 24 2024
R-4.4-winOKAug 24 2024
R-4.4-macOKAug 24 2024
R-4.3-winOKAug 24 2024
R-4.3-macOKAug 24 2024

Exports:armadilloarmadillo.get_tokendsAggregatedsAssignExprdsAssignResourcedsAssignTabledsConnectdsDisconnectdsFetchdsGetInfodsHasResourcedsHasTabledsIsAsyncdsIsCompleteddsKeepAlivedsListMethodsdsListPackagesdsListResourcesdsListSymbolsdsListTablesdsListWorkspacesdsRmSymboldsRmWorkspacedsSaveWorkspace

Dependencies:askpassassertthatbase64encclicrayoncurldplyrDSIfansigenericsgluehmshttrhttr2jsonlitelifecyclemagrittrmimeMolgenisAuthopensslpillarpkgconfigprettyunitsprogressR6rappdirsRcpprlangstringistringrsystibbletidyselecttriebeardurltoolsutf8vctrswithr

Analyse your data

Rendered fromDSMolgenisArmadillo.Rmdusingknitr::rmarkdownon Aug 24 2024.

Last update: 2023-10-27
Started: 2020-09-02

Develop DSMolgenisArmadillo

Rendered fromdevelopment.Rmdusingknitr::rmarkdownon Aug 24 2024.

Last update: 2023-10-27
Started: 2020-09-02

Using workspaces

Rendered fromworkspaces.Rmdusingknitr::rmarkdownon Aug 24 2024.

Last update: 2024-06-13
Started: 2020-09-08

Readme and manuals

Help Manual

Help pageTopics
Create an Armadillo DataSHIELD Service driverarmadillo
Get ID Tokenarmadillo.get_token
Aggregate datadsAggregate,ArmadilloConnection-method
Assign the result of an expressiondsAssignExpr,ArmadilloConnection-method
Assign a resourcedsAssignResource,ArmadilloConnection-method
Assign a tabledsAssignTable,ArmadilloConnection-method
Connect to an Armadillo DataSHIELD servicedsConnect,ArmadilloDriver-method
Disconnect from an Armadillo DataSHIELD ServicedsDisconnect,ArmadilloConnection-method
Fetch the resultdsFetch,ArmadilloResult-method
Get connection infodsGetInfo,ArmadilloConnection-method
Get driver infodsGetInfo,ArmadilloDriver-method
Get result infodsGetInfo,ArmadilloResult-method
Verify resource exists.dsHasResource,ArmadilloConnection-method
Verify table exist and can be accessible for performing DataSHIELD operations.dsHasTable,ArmadilloConnection-method
Armadillo DataShield Service asynchronous supportdsIsAsync,ArmadilloConnection-method
Get whether the operation is completeddsIsCompleted,ArmadilloResult-method
Keep a connection alivedsKeepAlive,ArmadilloConnection-method
List methodsdsListMethods,ArmadilloConnection-method
List packagesdsListPackages,ArmadilloConnection-method
List Armadillo DataSHIELD Service resourcesdsListResources,ArmadilloConnection-method
List R symbolsdsListSymbols,ArmadilloConnection-method
List Armadillo DataSHIELD Service tablesdsListTables,ArmadilloConnection-method
List workspacesdsListWorkspaces,ArmadilloConnection-method
Remove an R symboldsRmSymbol,ArmadilloConnection-method
Remove a workspacedsRmWorkspace,ArmadilloConnection-method
Save workspacedsSaveWorkspace,ArmadilloConnection-method